The 2001 Jacksonville Dolphins football team represented Jacksonville University as a member of the South Division of the Pioneer Football League (PFL) during the 2001 NCAA Division I-AA football season. Led by fourth-year head coach Steve Gilbert, the Dolphins compiled an overall record of 6–5 with a mark of 3–0 conference play, winning the PFL South Division title. Jacksonville advanced to the PFL Championship Game, where the Dolphins lost to . Jacksonville played home games at D. B. Milne Field in Jacksonville, Florida.
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