The 2006 North Carolina A&T Aggies football team represented North Carolina A&T State University as a member of the Mid-Eastern Athletic Conference (MEAC) during the 2006 NCAA Division I FCS football season. Led by first-year head coach Lee Fobbs, the Aggies compiled an overall record of 0–11, with a mark of 0–8 in conference play, and finished ninth in the MEAC.

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