The 2009 Lincoln Blue Tigers football team represented Lincoln University of Missouri as a member of the Great Lakes Football Conference (GLFC) during the 2009 NCAA Division II football season. The Blue Tigers were coached by a new head coach, Nate Cochran, who Lemar Parrish at the position. In coach Cochran's first season with the Blue Tigers, the team compiled a record of 0–11. Lincoln went 0–5 in conference play and never managed to score more than 14 points in a game this season. The team also did not score a touchdown until week 5. The Blue Tigers had a -271 point differential (72 scored, 343 allowed) in 2009.

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