Sarah Anne Tishkoff (born December 26, 1965) is an American geneticist and the David and Lyn Silfen Professor in the Department of Genetics and Biology at the University of Pennsylvania. She also serves as a director for the American Society of Human Genetics and is an associate editor at PLOS Genetics, G3 (Genes, Genomes, and Genetics), and Genome Research. She is also a member of the scientific advisory board at the David and Lucile Packard Foundation.
Tishkoff has been a leading figure in using genetics to advance understanding of modern human diversity. In particular she has made significant contributions to research on human genetic variation in African populations. In 1996, she and colleagues published the first paper to support the Out-of-Africa hypothesis using the nuclear genome, illustrating the extent of diversity among African populations. In 2001, Tishkoff and colleagues were some of the first to show the genomic signature of natural selection in human populations.
Some of her most cited research is a study on genomic variation around the lactase gene, the first to show coevolution of a cultural and genetic trait. Tishkoff was able to link evolution of cattle domestication to lactase persistence. Her more recent work includes the largest genomic study across ethnically diverse Africans, and the identification of novel genetic variants associated with skin color.
Tishkoff is a recipient of a National Institutes of Health Director's Pioneer Award, a David and Lucile Packard Career Award, a Burroughs/Wellcome Fund Career Award, and a Penn Integrates Knowledge (PIK) endowed chair. She was elected to the National Academy of Sciences in 2017.
Early life Sarah Tishkoff was born on December 26, 1965, in Los Angeles, California. She moved from Los Angeles to East Lansing, Michigan, when she was five, and from East Lansing to Klamath Falls, Oregon, in her early teens.Tishkoff, S. A. (2018, November 2). Sarah Tishkoff - Early and Personal Life [Telephone interview]. Her parents were both involved in academia. Her father was a professor of hematology and oncology at the University of California, Los Angeles and later the Director of the Red Cross for the Midwest of the United States. Her mother was a professor of history at the Oregon Institute of Technology. Tishkoff attended the University of California, Berkeley for her undergraduate degree. While in high school, she read Coming of Age in Samoa by Margaret Mead, sparking her initial interest in cultural anthropology.
Tishkoff's career was significantly influenced by several mentors throughout her education. While at UC Berkeley, she took courses in linguistics, cultural anthropology, physical anthropology, and archaeology, among other subjects. While at UC Berkeley, she was particularly inspired by Allan Wilson's research using molecular approaches to understand evolutionary change. She was further inspired by many of Wilson's graduate students, including Vincent Sarich, Mary Claire-King, and George Sensabaugh.
In particular, while at UC Berkeley she took a course taught by Vincent Sarich, who was interested in genetics, human development, and evolution, and worked on comparing proteins in humans with those in chimpanzees. His unique teaching style and controversial comments piqued Tishkoff's interest in the field, and encouraged her to question human origins and the genetic basis of human traits more deeply. After realizing its importance in conducting her work on human evolutionary history, she added genetics as an additional major at UC Berkeley.
Tishkoff cites her experience meeting the Khoisan people at a meeting on Khoisan origins in Cape Town, during her time in Johannesburg, as a transformative event, as the Khoisan people have one of the oldest genetic lineages in the world. During this visit she met with cultural anthropologists, geneticists, and representatives of Khoisan groups.
Tishkoff became a professor at the University of Maryland in 2000, and went to the field for the first time a year later. This initial four-month-long trip, funded by the David and Lucile Packard Career Award, allowed her to pursue fieldwork that led to research in African population history and the genetics of variable traits and disease. Tishkoff's lab continues to conduct field work in Africa, taking care to do the research ethically. Her lab works to have their African collaborators treated as equal partners in the research, and ensures research results are sent back to participants.
Tishkoff is married to Evan Leach, whom she met on her first day at Yale graduate school. She currently resides in Pennsylvania.
Education Tishkoff graduated with a Bachelor of Science in genetics and a Bachelor of Arts in anthropology from the University of California, Berkeley in 1989. She went on to receive her Master of Philosophy in human genetics from the Yale School of Medicine in 1992. Tishkoff completed her formal education upon acquiring her PhD in genetics from Yale University in 1996, under the continued advisement of Kenneth Kidd. While working in the Kidd Lab, Tishkoff developed an interest in African genomics and evolution, leading her to write her thesis on the "Patterns of nuclear haplotype frequency variation and linkage disequilibrium in a global sample of human populations". Shortly after completing her PhD, Tishkoff continued the research started in her thesis, and consequently published a paper titled "Global patterns of linkage disequilibrium at the CD4 locus and modern human origins" in the journal Science.
Career From 1997 to 2000, Tishkoff was a postdoctoral fellow at The Pennsylvania State University. During this period, Tishkoff was researching links between stable polymorphisms and microsatellites in human populations with Dr. Andrew G. Clark. She was also a visiting research fellow in 1997 at the University of the Witwatersrand in South Africa. In 2000, Tishkoff became an Assistant Professor in the Department of Biology at the University of Maryland, College Park. In 2005, Tishkoff was promoted to Associate Professor and she held that position until she left the university in 2007.
In 2008, Tishkoff became the David and Lyn Silfen University Associate Professor at the University of Pennsylvania. In 2012, Tishkoff became a Full Professor at the University of Pennsylvania, where she is currently the David and Lyn Silfen University Professor. Tishkoff also currently holds appointments in the Department of Biology, which is within the University's School of Arts and Sciences, and in the Department of Genetics, which is within the University's School of Medicine. Tishkoff and her lab members study evolutionary genomics, African phenotypic diversity, the genetic basis of resistance to infectious diseases, and the genetic basis of human adaptations. Their work combines field work, laboratory research, and computational approaches to examine the effect of genetic variation in living and past African populations.
In 2017, Tishkoff was elected to the National Academy of Sciences, which is considered a high honor that recognizes distinguished scientists in their respective fields. Throughout her career, Tishkoff has also been a part of numerous professional associations and scientific societies. She currently serves on the board of director for the American Society of Human Genetics, and she is a member of the scientific advisory board at the David and Lucile Packard Foundation. She is an associate editor at PLOS Genetics, G3 (Genes, Genomes, and Genetics), and Genome Research.
Research The primary focus of Tishkoff's research career has been on human genetic variation in African populations. The central aims of her research are to better understand the origins of modern humans and the histories of African populations, and the genetic underpinnings of disease susceptibility. Advances in these areas of research may aid drug development for diseases with known genetic bases, and the development of more effective medical treatments for living African populations.
African genomics
Integrative genomics Tishkoff's research methodology applies an integrative genomics approach that combines data from the genome, epigenome, proteome, transcriptome, metabolome, and microbiome of various African ethnic groups to identify genetic and environmental factors that affect traits related to human measurements, metabolism and immune system.
Evolutionary genomics Tishkoff's work also addresses questions about the evolutionary history of Homo sapiens. One of the key findings in this area of research includes the discovery of genetic signatures of interbreeding between anatomically modern humans and extinct hominins. Tishkoff was also involved in a study that rejected the hypothesis that ancestors of anatomically modern humans were genetically isolated in Africa. This study was based on whole-genome simulations from two Western African Pygmy populations, Biaka and Baka, and suggested the existence of introgression from an unknown archaic population.
Phenotypic diversity Sarah Tishkoff and colleagues also focus their research on acquiring genomic and phenotypic data from geographically and culturally distinct African populations, which are underrepresented in genetic studies and whose analysis may uncover new aspects of human evolutionary history, including susceptibility to diseases and migration patterns. By genotyping approximately 2400 individuals from 121 geographically diverse African populations, Tishkoff and colleagues found evidence for 14 genetically divergent ancestral populations in Africa, and by comparing the genetic information with archaeological and self-described phenotypic data they showed high cultural and linguistic similarity within each cluster. Using their novel set of acquired genetic markers they were also able to trace back the shared ancestry of African Americans with African populations, finding a dominant shared ancestry from Niger-Kordofanian populations in Western Africa. Additionally, based on this research they have claimed that migrations from non-African populations into northern Africa resulted in increased genetic diversity in that region. Their work has demonstrated the need for further genomic analyses of African populations as a means of identifying correlations between allele frequencies and risk of certain diseases, and potentially designing therapeutic drugs for treating diseases in populations with similar genetic backgrounds.
Genotypic and phenotypic adaptation in humans Another focus of Tishkoff's research group is understanding how different geographical and environmental influences correlate with genotypic and phenotypic changes in African populations.
Resistance to infectious disease Tishkoff has focused on the influence of malaria on human populations to study the genetic basis of resistance to infectious diseases. Tishkoff and colleagues found that the presence of malaria was correlated with the allele frequencies of the G6PD that are believed to provide resistance to malaria but also to increase the risk of blood-related diseases. Haplotype analysis of Med and A- allele mutations at the G6PD locus revealed that their increased frequency occurred after the agricultural practices began. Tishkoff and colleagues suggested that agriculture led to greater exposure to malaria, which created a selective pressure for alleles that confer resistance.