Honegger is a surname. Notable people with the surname include:

Arthur Honegger (1892–1955), Swiss composer Arthur Honegger (journalist), Swiss journalist Blanche Honegger Moyse (1909–2011), American conductor Doug Honegger (born 1968), Canadian-born former Swiss professional ice hockey defenceman Elise Honegger (1839–1912), Swiss feminist and journalist Eric Honegger (born 1946), Swiss politician, member of the FDP.The Liberals party, and manager Fritz Honegger (1917–1999), Swiss politician Gottfried Honegger (1917–2016), Swiss artist and graphic designer Klara Honegger (1860–1940), Swiss suffragist and pacifist activist Marc Honegger (1926–2003), French musicologist and choirmaster Rosmarie Honegger (born 1947), Swiss lichenologist Sylvia Honegger (born 1968), Swiss cross country skier