Stony Run may refer to:
Stony Run (Baltimore), a stream in Baltimore, Maryland Stony Run (Buffalo Creek), a stream in Union County, Pennsylvania Stony Run (Little Catawissa Creek), a stream in Columbia and Schuylkill Counties Pennsylvania Stony Run (Minnesota), a stream in Big Stone County, Minnesota Stony Run, Pennsylvania Stony Run Township, Yellow Medicine County, Minnesota Stony Run (Anderson Creek tributary), a stream in Clearfield County, Pennsylvania
See also Stony Brook (disambiguation) Stony Run Creek Stony Creek (disambiguation)