The 1999 Atlantic hurricane season was a very active, destructive and deadly season in which 16 tropical cyclones formed. Among them, 12 became named storms, of which 8 became hurricanes. Five hurricanes intensified further into major hurricanes. The season featured a record-tying five Category 4 hurricanes. This high activity is mostly due to a persistent La Niña that developed in the latter half of the previous year. The season officially began on June 1, and ended on November 30. These dates conventionally delimit the period of each year when most tropical cyclones form in the Atlantic basin. The first storm, Arlene, formed on June 11 to the southeast of Bermuda. It meandered slowly for a week and caused no impact on land. Other tropical cyclones that did not affect land were Hurricane Cindy, Tropical Storm Emily, and Tropical Depression Twelve. Localized or otherwise minor damage occurred from Hurricanes Bret, Gert, and Jose, and tropical storms Harvey and Katrina.

The most significant storm of the season was Hurricane Floyd, a strong Category 4 hurricane that caused devastating flooding along the East Coast of the United States, especially in North Carolina. Damage from the storm totaled approximately $6.5 billion (1999 USD) and there were at least 77 fatalities, making it the deadliest hurricane in the United States since Hurricane Agnes in 1972. Flooding from Floyd in North Carolina followed Hurricane Dennis, a slow and erratic–moving storm that dropped heavy rainfall in the eastern portion of the state. Tropical Depression Eleven in October contributed to extreme flooding in Mexico, which left 636 people dead and caused $491.3 million in damage, though impact could not be distinguished from the storm itself. Hurricane Irene caused extensive flooding in Cuba and Florida, with lesser effects in the Bahamas and North Carolina. Irene was the second–costliest storm of the season, with about $800 million in damage. Hurricane Lenny was an unusual eastward–moving storm in the Caribbean Sea and a strong late–season storm. It caused extensive damage in the Lesser Antilles in the month of November. Collectively, the storms of the 1999 Atlantic hurricane season caused at least 775 fatalities and $8.78 billion in losses.

Seasonal forecasts +Predictions of tropical activity in the 1999 seasonSourceDateNamedstormsHurricanesMajorhurricanesRefAverage (1981–2010) 12.1 6.4 2.7 Record high activity30157†Record low activity10†0†CSUDecember 4, 19981494WRCEarly 1999106N/ACSUApril 7, 19991494TSRJune 1, 19991272CSUJune 4, 19991494CSUAugust 6, 19991494Actual activity 1285† Most recent of several such occurrences. (See all) Ahead of and during each hurricane season, various national meteorological services, scientific agencies, and noted hurricane experts issue forecasts of hurricane activity. These include forecasters from the United States National Oceanic and Atmospheric Administration (NOAA)'s National Hurricane and Climate Prediction Center's, William M. Gray and his associates at Colorado State University (CSU), as well as Weather Research Center (WRC) and Tropical Storm Risk (TSR), then known as TSUNAMI. The forecasts include weekly or monthly assessments of the significant factors that help determine the number of tropical storms, hurricanes, and major hurricanes within a particular year.

Gray and his team at CSU issued their initial season outlook on December 4, 1998, predicting fourteen named storms, nine hurricanes, and four major hurricanes. The three main factors for this above average season forecast cited included a continuation of abnormally warm sea surface temperatures, the probability that La Niña conditions would remain, and that the quasi-biennial oscillation (QBO) winds would be in a westerly phase. Early in 1999, WRC issued its forecast for the season, projecting ten named storms and six hurricanes, but no prediction on the number of major hurricanes. In subsequent outlooks from Gray and his associates in April, June, and August, the predictions were unchanged.

On April 7, CSU noted that the probability of a major hurricane landfall in the United States was 72%, including a 54% chance on the East Coast and a 40% likelihood on the Gulf Coast. In their outlook on May 27, experts at NOAA noted that an above average season was a strong possibility. An addition to a La Niña, vertical wind shear would be decreased across much of the Caribbean Sea and tropical Atlantic Ocean, and a favorable jet pattern for tropical waves to develop into tropical cyclones. On June 1, TSR predicted that there would be 12 named storms, 7 hurricanes, and 2 major hurricanes.

As stated by NOAA and CSU, an average Atlantic hurricane season between 1981 and –2010 contains roughly 12 tropical storms, 6 hurricanes, 3 major hurricanes, and an accumulated cyclone energy (ACE) Index of 66–103 units. NOAA typically categorizes a season as either above-average, average, of below-average based on the cumulative ACE Index; however, the number of tropical storms, hurricanes, and major hurricanes within a hurricane season is considered occasionally as well.

Seasonal summary

The Atlantic hurricane season officially began on June 1, 1999, and the first tropical cyclone developed on June 11. It was an above–average season in which 16 tropical cyclones formed. Twelve depressions attained tropical storm status, and eight of these became hurricanes. Five hurricanes intensified further into major hurricanes. The season featured a record-tying five Category 4 hurricanes, later tied again in 2005 and 2020. These were Bret, Cindy, Floyd, Gert, and Hurricane Lenny. The last storm of the season, Hurricane Lenny, dissipated on November 23, which was about a week before the official season ending on November 30, 1999.

A persistent La Niña that developed during the previous season was attributed to the above average activity. Between August and October, there was very low wind shear over the Caribbean Sea and western Atlantic Ocean, attributed to a combination of abnormal upper-level easterly winds and low-level westerly winds. Six hurricanes and two tropical storms made landfall during the season and caused at least 123 deaths and approximately $8.19 billion in damage. Hurricane Gert also caused damage and fatalities, despite not making landfall.

Overall, the season's activity was reflected with a high cumulative accumulated cyclone energy (ACE) rating of 177. ACE is, broadly speaking, a measure of the power of the hurricane multiplied by the length of time it existed, so storms that last a long time, as well as particularly strong hurricanes, have high ACEs. It is only calculated for full advisories on tropical systems at or exceeding or tropical storm strength.

Systems Tropical Storm Arlene

Along a diffuse front, a broad area of low pressure in association with an upper-level low was noted several hundred miles northeast of Puerto Rico on June 8. After the circulation reformed within the area of stronger convection, the NHC estimated that Tropical Depression One developed at 18:00 UTC on June 11 about southeast of Bermuda. Initially, the system resembled a subtropical cyclone, due to its frontal characteristics. The nascent depression drifted northward for 24 hours, and during this time, it strengthened and was upgraded to Tropical Storm Arlene at 12:00 UTC on June 12, based on Dvorak satellite classifications. The storm intensified further to its peak intensity at 00:00 UTC on June 13, with estimated maximum sustained winds of and a minimum barometric pressure of , based on ship reports and satellite. Subsequently, weakening due to westerly wind shear, Arlene tracking westward on June 13 and turned northwest the following day. Because the steering current became poorly defined, it drifted starting on June 15, and executed a small cyclonic loop later that day. At 00:00 UTC on June 17, Arlene was downgraded to a tropical depression. Later that day, it passed about east of Bermuda, where gale-force winds and abnormally high tides were observed. The depression weakened further due to decreasing sea surface temperatures and dissipated early on June 18.

Tropical Depression Two

A tropical wave crossed the west coast of Africa on June 20. As the wave moved into the western Caribbean Sea on June 30, a broad cyclonic turning was noted. The system moved over the Yucatán Peninsula on July 1, a day before emerging into the Bay of Campeche as a weak low pressure area. Later on July 2, deep convection became more organized while the system was centered over the southwestern Gulf of Mexico. By 18:00 UTC, the low developed into Tropical Depression Two. Around 04:00 UTC on July 3, the depression made landfall about south-southeast of Tuxpan, Veracruz, with winds of . Eight hours later, it dissipated over the mountains of Mexico. The depression dropped heavy rain on the area amounting to a maximum of at Tanzabaca, San Luis Potosí. In some areas, up to of precipitation fell in 24 hours.

Hurricane Bret

Late on August 18, a tropical wave in the Bay of Campeche spawned Tropical Depression Three. The depression drifted and was initially hampered by wind shear. By late on August 19, the depression was upgraded to Tropical Storm Bret amid more favorable atmosphere conditions. Bret then moved generally northward and strengthened into a hurricane early on August 21. Bret strengthened significantly over the next 36 hours, peaking as a Category 4 hurricane with a minimum barometric pressure of on August 22. Thereafter, the storm began to weaken while curving west-northwestward. At 00:00 UTC on August 23, Bret made landfall in central Padre Island, Texas, as a Category 3 hurricane with winds of . After moving inland, the storm weakened quickly, falling to tropical depression status on August 24. Early the following day, Bret dissipated near the border of Coahuila and Chihuahua.

Bret was a small tropical cyclone that made landfall in a sparsely–populated region of Texas, resulting in relatively little damage. Heavy rainfall in the area peaked at in Sarita. At least 200 homes and large agricultural fields were flooded in Duval County. Strong winds left approximately 64,000 people without electricity in South Texas. Four people died after a truck and a tractor collided near Laredo due to slick roads. In Mexico, the storm brought flooding to Coahuila, Nuevo Leon, and Tamaulipas, with an estimated of rain falling in Nuevo Leon. Numerous homes in the affected regions were damaged or destroyed, leaving roughly 150 people homeless. Three people died in Mexico – one was trampled to death during evacuation, another was electrocuted, and the third drowned. Overall, the storm caused $15 million in damage.

Hurricane Cindy

On August 18, a tropical wave moved westward off the coast of Africa. With low pressures and gradually organizing convection, Tropical Depression Four developed west of Senegal early on August 19. Initially it failed to intensify due to wind shear, and the center became ill-defined on August 20. After passing south of Cape Verde, the depression intensified into Tropical Storm Cindy as the convection became concentrated around the center. Due to a strong ridge, Cindy moved westward, before turning northwestward by August 21. Banding features gradually increased as outflow improved, and late on August 21, Cindy became a hurricane. Afterward, increased wind shear dislocated the convection from the center, which weakened Cindy to a tropical storm.