The 1999 Meistriliiga was the ninth season of the Meistriliiga, Estonia's premier football league. Levadia won their first title.

League table

Relegation play-off

Lelle won 4–2 on aggregate and retained their Meistriliiga spot; however, Lelle ceded their league entry to FC Valga both being associate clubs of Flora

Results Each team played every opponent four times, twice at home and twice on the road, for a total of 36 games.

First half of season

Second half of season

Top scorers RankPlayerClubGoals1 Toomas KrõmLevadia192 Andrei KrõlovLevadia183 Dmitri UstritskiTulevik164 Vitali LeitanLantana155 Indrek ZelinskiFlora146 Maksim GruznovNarva Trans137 Kristen ViikmäeFlora128 Aleksandr MarašovNarva Trans109 Konstantin KolbasenkoLevadia910 Indro OlumetsLevadia8

References

Estonia - Estonia 1999 (RSSSF)